dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01378
Location and strand information: 1637 - 3091 (-)
Family: 2.A.66.2.16
Protein type: TC
Protein description: Putative O-antigen transporter

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01379
Location and strand information: 3102 - 4127 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01380
Location and strand information: 4158 - 6035 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01381
Location and strand information: 6055 - 7185 (-)
Family: 4.D.1.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01382
Location and strand information: 7204 - 8229 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 9.3702
Protein molecular weight: 39744.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01383
Location and strand information: 8232 - 9158 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.898
Protein molecular weight: 35638.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01384
Location and strand information: 9181 - 10167 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.6565
Protein molecular weight: 36136
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01385
Location and strand information: 10194 - 11510 (-)
Family: null
Protein type: null
Protein description: UDP-glucose 6-dehydrogenase YwqF

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01386
Location and strand information: 11586 - 13424 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01387
Location and strand information: 13506 - 14963 (-)
Family: 2.A.66.2.16
Protein type: TC
Protein description: Putative O-antigen transporter

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01388
Location and strand information: 14970 - 15998 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9904
Protein molecular weight: 39609.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01389
Location and strand information: 16054 - 17061 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9156
Protein molecular weight: 39314.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01390
Location and strand information: 17052 - 18191 (-)
Family: GT4
Protein type: CAZyme
Protein description: Putative glycosyltransferase EpsF
Protein isoelectric point: 7.3727
Protein molecular weight: 43881.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01391
Location and strand information: 18172 - 19593 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01392
Location and strand information: 19599 - 20675 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7338
Protein molecular weight: 43043.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01393
Location and strand information: 20659 - 21888 (-)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1076
Protein molecular weight: 46696.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01394
Location and strand information: 21919 - 22620 (-)
Family: 9.B.18.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01395
Location and strand information: 22733 - 23935 (-)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01396
Location and strand information: 23958 - 25982 (-)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01397
Location and strand information: 26009 - 27949 (-)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01398
Location and strand information: 28398 - 29444 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01399
Location and strand information: 29826 - 31988 (-)
Family: 2.A.6.4.2
Protein type: TC
Protein description: Protein translocase subunit SecDF

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01400
Location and strand information: 32010 - 32459 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01401
Location and strand information: 32606 - 33721 (-)
Family: null
Protein type: null
Protein description: ATP/GTP phosphatase

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01402
Location and strand information: 34245 - 34730 (+)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

Gene clsuter ID: MGYG000003777_16|CGC1
Gene ID: MGYG000003777_01403
Location and strand information: 34806 - 36077 (-)
Family: 2.A.23.1.5
Protein type: TC
Protein description: Proton/glutamate-aspartate symporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003777_01378	Putative O-antigen transporter	TC	1637	3091	-	2.A.66.2.16
MGYG000003777_01379	hypothetical protein	null	3102	4127	-	No domain
MGYG000003777_01380	hypothetical protein	null	4158	6035	-	No domain
MGYG000003777_01381	hypothetical protein	TC	6055	7185	-	4.D.1.1.3
MGYG000003777_01382	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	7204	8229	-	GT2
MGYG000003777_01383	hypothetical protein	CAZyme	8232	9158	-	GT2
MGYG000003777_01384	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	9181	10167	-	GT2
MGYG000003777_01385	UDP-glucose 6-dehydrogenase YwqF	null	10194	11510	-	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000003777_01386	hypothetical protein	null	11586	13424	-	No domain
MGYG000003777_01387	Putative O-antigen transporter	TC	13506	14963	-	2.A.66.2.16
MGYG000003777_01388	hypothetical protein	CAZyme	14970	15998	-	GT2
MGYG000003777_01389	hypothetical protein	CAZyme	16054	17061	-	GT2
MGYG000003777_01390	Putative glycosyltransferase EpsF	CAZyme	17052	18191	-	GT4
MGYG000003777_01391	hypothetical protein	null	18172	19593	-	Wzy_C
MGYG000003777_01392	hypothetical protein	CAZyme	19599	20675	-	GT2
MGYG000003777_01393	hypothetical protein	CAZyme	20659	21888	-	GT4
MGYG000003777_01394	hypothetical protein	TC	21919	22620	-	9.B.18.1.3
MGYG000003777_01395	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	22733	23935	-	Aminotran_1_2
MGYG000003777_01396	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	23958	25982	-	9.B.18.2.1
MGYG000003777_01397	Transcriptional regulator LytR	null	26009	27949	-	LytR_cpsA_psr
MGYG000003777_01398	hypothetical protein	null	28398	29444	-	PDDEXK_2
MGYG000003777_01399	Protein translocase subunit SecDF	TC	29826	31988	-	2.A.6.4.2
MGYG000003777_01400	hypothetical protein	null	32010	32459	-	No domain
MGYG000003777_01401	ATP/GTP phosphatase	null	32606	33721	-	AAA_21
MGYG000003777_01402	Cytidylate kinase	TC	34245	34730	+	2.A.115.2.14
MGYG000003777_01403	Proton/glutamate-aspartate symporter	TC	34806	36077	-	2.A.23.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature